The 9 Best Boutique Hotels with Spa in Yamanashi (2025)

Nestled against the dramatic backdrop of Japan's iconic Mount Fuji, Yamanashi is a treasure trove of natural beauty and cultural richness. Here, traditional craftsmanship meets contemporary aesthetics, from the serene waters of Lake Kawaguchi to the lush vineyards that blanket the region. This picturesque prefecture invites visitors to savor its exquisite local cuisine, explore historic temples, and immerse themselves in the tranquil ambiance that defines Japanese hospitality. The boutique hotel scene in Yamanashi perfectly captures this essence, offering personalized experiences in uniquely designed spaces that reflect the spirit of their surroundings. At Mizno Hotel, guests are treated to breathtaking views of Mount Fuji, complemented by luxurious amenities and a warm atmosphere. La Vista Fujikawaguchiko enhances your stay with hot spring baths overlooking the lake, ensuring a rejuvenating escape. Meanwhile, Beautiful Japanese Garden Kagetsu envelops you in nature’s embrace with its stunning gardens and traditional architecture. Discover the charm of Yamanashi Boutique Hotels with Spa and begin planning an enchanting getaway that promises both relaxation and adventure.

List Of Best Boutique Hotels with Spa Yamanashi

boutique hotels in Yamanashi

Mizno Hotel

Hotel
401-0303 Yamanashi, Fujikawaguchiko, Azagawa 187 , Japan

Perched gracefully on a hilltop, Mizno Hotel offers an intimate escape where the breathtaking views of Mount Fuji and the serene waters of Lake Kawaguchi unfold before your eyes. This luxurious haven invites you to indulge in a harmonious blend of contemporary elegance and traditional Japanese charm, creating an unparalleled atmosphere for romance, relaxation, and rejuvenation.

Romantic Break - Every room at Mizno embraces couples with panoramic views of the majestic Mount Fuji, making it the perfect backdrop for unforgettable moments shared together. The soft glow of evening lights reflects off the lake, enhancing the romance that this chic retreat exudes.

Spa breaks - Rejuvenate your senses in the soothing embrace of the private open-air baths, where the air is perfumed with the gentle scent of cedarwood and the faint rustle of leaves serenades you into tranquility. After a day of exploration, let the calming waters wash away your worries in a space designed for pure bliss.

Cultural explorers - Immerse yourself in the rich tapestry of Japanese culture as you choose between luxurious Western-style beds or authentic futon bedding on tatami floors, allowing you to experience the essence of Japan in comfort. Art lovers will appreciate the hotel's unique décor, featuring hand-painted artworks adorning not just the lobby but also winding corridors, creating a gallery-like ambiance throughout your stay.

Guest Experiences - Imagine waking up to the first rays of sunlight illuminating your room with a golden hue, only to be greeted by the sight of Mount Fuji standing tall and proud outside your window. The cool touch of the Yukata robe wraps around you as you step onto your private balcony, where the crisp mountain air mingles with the distant sounds of laughter from e-bike riders exploring the scenic paths nearby.

boutique hotels in Yamanashi

La Vista Fujikawaguchiko

Resort
401-0304 Yamanashi, Fujikawaguchiko, Kawaguchi 2395, Japan

Nestled in the serene embrace of Fujikawaguchiko, La Vista Fujikawaguchiko offers a luxurious escape where modern elegance meets traditional Japanese hospitality. Picture waking up to breathtaking views of Mount Fuji, enveloped in tranquility and surrounded by lush landscapes, all while indulging in exceptional service that caters to your every need.

Romantic Retreat - With private balconies overlooking the majestic Mount Fuji, every moment becomes a cherished memory, perfect for couples seeking intimacy and peace amidst nature's grandeur.

Culinary Delights - Savor a culinary journey at the on-site restaurant, where each meal transforms into an artful experience—think exquisite tasting menus that tantalize your palate with fresh, local ingredients and innovative flavors, all served with stunning views.

Wellness Sanctuary - Relax and rejuvenate in the soothing hot spring baths, whether enjoying the public onsen or one of the private themed onsens, where the calming sound of water flows and the air is infused with a subtle mineral aroma, creating a serene ambiance for reflection and relaxation.

Guest Experiences - Imagine slipping into your private open-air bath as the sun sets behind Mount Fuji, the crisp evening air filled with the scent of cedar and earth, while the gentle sounds of rustling leaves accompany your thoughts—a moment of pure serenity that feels both intimate and grand.

boutique hotels in Yamanashi

Beautiful Japanese Garden Kagetsu

Hotel
406-0024 Yamanashi, Fuefuki, Isawa-cho Kawanakajima 385, Japan

Nestled amidst the serene landscapes of Fuefuki, Beautiful Japanese Garden Kagetsu offers an enchanting retreat where elegance meets tranquility. This upscale ryokan envelops you in the soothing embrace of nature, inviting couples, wellness seekers, and cultural explorers alike to escape into a world of timeless beauty and luxurious comfort.

Romantic Hideaway - Indulge in intimate moments as you stroll hand-in-hand through the expansive gardens, where koi fish glide lazily through crystal-clear ponds, creating the perfect backdrop for romantic reflection.

Culinary Delights - Savor the exquisite flavors of traditional Japanese cuisine, from sumptuous multi-course dinners featuring Kuroge beef prepared on lava stone to delightful breakfasts served with soft-boiled eggs and homemade natto, all enjoyed with panoramic views of the serene garden.

Wellness Sanctuary - Immerse yourself in rejuvenation at the natural hot spring baths, where the gentle sound of water cascades over smooth stones creates a harmonious symphony, offering both indoor serenity and an outdoor setting that feels like a secret paradise.

Guest Experiences - As you wander through the hotel's lush garden, the intoxicating scent of blooming cherry blossoms dances in the air, while the tranquility is only interrupted by the faint rustle of leaves. Guests have reveled in the surprising intimacy of their private onsen, where even the gentle splash of koi asking for food becomes a charming invitation to relax.

boutique hotels in Yamanashi

Fuji Lake Hotel

Hotel
401-0301 Yamanashi, Fujikawaguchiko, Funatsu 1, Japan

Nestled on the serene shores of Lake Kawaguchi, surrounded by the majestic silhouette of Mount Fuji, Fuji Lake Hotel is an oasis of tranquility and luxury. Here, the gentle lapping of the water merges with the soft rustle of leaves, creating a symphony that sets the stage for romantic getaways and rejuvenating retreats alike.

Breathtaking Views - Each room offers a stunning panorama, where floor-to-ceiling windows frame the mesmerizing dance of sunlight on the lake or the awe-inspiring presence of Fuji-san, inviting guests to lose themselves in nature’s artistry.

Culinary Delights - Indulge in exquisite buffet meals that celebrate seasonal ingredients; each bite transports your palate through a delightful fusion of Japanese kaiseki flavors and Western culinary traditions, all served against the backdrop of breathtaking lake views.

Private Onsen Experience - Step into your own sanctuary with selected rooms featuring private open-air baths, allowing you to soak in warm, mineral-rich waters while taking in unparalleled views of iconic landscapes—a moment where time seems to stand still.

Guest Experiences - One guest recounted the joy of sipping steaming green tea while wrapped in a traditional yukata, mesmerized by the golden hues of sunset spilling across the lake, as the sweet scent of fresh pastries wafted from the nearby bakery, managed by the hotel’s talented French chef.

boutique hotels in Yamanashi

Hakone Hisui

Hotel
250-0631 Kanagawa, Hakone, Sengokubara 837, Japan

Nestled in the serene embrace of Hakone's lush landscapes, Hakone Hisui offers an intimate retreat where modern luxury meets traditional Japanese hospitality. Each carefully appointed room invites you to unwind in style, with private terraces that overlook tranquil gardens and the therapeutic sound of bubbling hot springs nearby, creating a harmonious oasis for couples and wellness seekers alike.

Romantic Escape - Explore thoughtfully designed spaces that effortlessly blend contemporary elegance with warm, inviting touches. With soft ambient lighting and hidden nooks perfect for shared moments, every corner of Hakone Hisui whispers romance.

Spa & Relaxation Lovers - Indulge in rejuvenating hot spring baths and saunas that promise blissful relaxation. The mineral-rich waters soothe the body while the gentle scent of cedarwood envelops you, making each soak a sensory journey.

Outstanding Location - Located within easy reach of cultural gems like the Hakone Lalique Museum and Venetian Glass Museum, you can immerse yourself in the rich artistry of the region, all while returning to your tranquil sanctuary at the end of a fulfilling day.

Guest Experiences - Guests have discovered the joy of sipping on freshly brewed matcha in their spacious rooms, the fragrant steam mingling with the aroma of local delicacies wafting from the restaurant below. A delightful surprise comes from the attentive staff who remember your name and preferences, making you feel less like a visitor and more like family.

boutique hotels in Yamanashi

Kinnotake Sengokuhara(Adult Only)

Hotel
250-0631 Kanagawa, Hakone, Sengokuhara 817-342, Japan

Nestled in the serene embrace of Hakone's lush landscapes, Kinnotake Sengokuhara is an adult-only sanctuary where luxury meets tranquility. With every room boasting a private hot-spring bath and stunning views of nature’s splendor, this elegant retreat invites couples to immerse themselves in romance and relaxation, creating unforgettable memories amidst refined Japanese aesthetics.

Private Hot Tub Retreats - Each accommodation features its own hot spring bath, offering a secluded space to unwind as the soothing water envelops you, enhanced by the gentle rustle of leaves outside your window.

Culinary Indulgence - Delight in traditional Japanese meals served directly to your room, where every dish is a visual masterpiece, inviting you to savor the delicate balance of flavors and artistry that defines each kaiseki presentation.

Exceptional Service - Experience unparalleled hospitality from attentive staff who anticipate your needs with grace, ensuring your stay feels effortlessly luxurious—from the warmth of a yukata draped on your shoulders to the meticulous attention given during meal service.

Guest Experiences - Awakening to the aroma of freshly brewed tea wafting through the air, one guest relished moments spent soaking in their private tub under a canopy of stars, while another noted how the friendly staff remembered their preferences, turning ordinary meals into personal celebrations.

boutique hotels in Yamanashi

Hakone Retreat Före

Hotel
250-0631 Kanagawa, Hakone, Sengokuhara 1286-116, Japan

Nestled within the verdant embrace of Hakone's mountain ranges, Hakone Retreat Före is a sanctuary where luxury meets nature's tranquility. As you enter this elegant hideaway, the serene sounds of rustling leaves and distant water flows invite you to leave the world behind and indulge in moments of pure romance and rejuvenation.

Total relaxation - Immerse yourself in the soothing warmth of the outdoor hot spring bath, accessed via a charming wooden deck that meanders through the forest, offering glimpses of nature at its most captivating.

Wellbeing - Rejuvenate your senses with thoughtfully curated wellness experiences, including spa treatments designed to harmonize body and soul amid breathtaking views that inspire inner peace.

Outstanding location - Set against a backdrop of lush forests and majestic mountains, the hotel offers a perfect blend of serenity and adventure, making it an ideal base for exploring local cultural treasures and scenic vistas.

Guest Experiences - As evening falls, guests often find themselves enchanted by the gentle presence of deer flitting through the trees while sipping warm coffee from their room, all set against the tranquil ambiance of the forest that envelops them like a soft, welcoming hug.

boutique hotels in Yamanashi

Senkyoro

Hotel
250-0631 Kanagawa, Hakone, Sengokuhara 1284, Japan

Nestled in the tranquil embrace of Hakone's lush mountains, Senkyoro Ryokan is a sanctuary where time seems to pause. Guests are enveloped by the scent of cedar and the gentle sound of flowing water, creating an intimate atmosphere perfect for romantic getaways or peaceful retreats. Here, traditional elegance meets modern comforts, inviting you to unwind and reconnect with nature.

Total Relaxation - Indulge in rejuvenating soaks in either the serene indoor or picturesque outdoor onsens, where warm mineral waters cradle your body while breathtaking mountain views capture your heart.

Culinary Delights - Experience exquisite kaiseki dining, where each dish is a work of art, beautifully presented and bursting with seasonal flavors. From delicate sashimi to vibrant pickles, every bite tells a story of Japanese culinary tradition.

Intimate Accommodations - Step into a plush haven featuring tatami flooring and luxurious futons that invite you to lose yourself in restful slumber, all while enjoying calming sounds of nature filtering through your window.

Guest Experiences - As the sun set behind the mountains, one guest found magic in their yukata-clad evenings, dining on the terrace under a canopy of stars while sipping fragrant tea, the air mingling with laughter and the distant trickle of a nearby stream.

boutique hotels in Yamanashi

Hakone Retreat villa 1/f

Hotel
250-0631 Kanagawa, Hakone, Sengokuhara 1286-116, Japan

Nestled in the serene embrace of Hakone's verdant landscapes, Hakone Retreat villa 1/f is an adults-only sanctuary that invites you to experience the perfect blend of luxury and tranquility. Here, each moment unfurls like a delicate cherry blossom—intimate, fleeting, and utterly enchanting. Enjoy the soothing sounds of nature as you unwind, surrounded by elegantly designed interiors and private amenities tailored for romance and relaxation.

Total Relaxation - Rejuvenate your senses in the heart of nature with the ryokan's picturesque gardens and tranquil open-air baths. Each corner is thoughtfully crafted to enhance your well-being, from the invigorating geothermal springs to the soothing ambiance that fills the air.

Private Onsen - Indulge in the ultimate luxury of your very own private onsen, where steaming mineral waters promise soothing warmth and serenity. Picture yourself enveloped in blissful steam while gazing out at breathtaking views, creating memories that linger long after your visit.

Culinary Delights - Savor exquisite Japanese cuisine artfully prepared with local ingredients, where every meal becomes an aesthetic experience. From beautifully presented breakfasts that awaken your taste buds to sumptuous dishes infused with regional flavors, dining here is not just a meal—it's a celebration of culture and tradition.

Guest Experiences - As you step into the villa, the calming aroma of fresh cedar wood embraces you, creating an instant sense of home. Guests often marvel at the meticulous attention to detail, from warm welcomes by attentive staff who remember your name to the cozy flicker of the fireplace, casting a soft glow during quiet evenings spent in delightful conversation.

Best Boutique Hotels with Spa that guests love in Yamanashi

boutique hotels in Yamanashi
401-0303 Yamanashi, Fujikawaguchiko, Azagawa 187 , Japan
9.4
1912 reviews
From $299

Guest Review: The view from our room was incredible. We were lucky enough that the view of Mt Fuji was completely clear the day we visited. The staff at the hotel were so welcoming and lovely. They have a shuttle to the train station that runs every 30 mins starting at 8. We had wanted to leave at 7am so asked to book a taxi. Instead of booking us a taxi they stopped what they were doing and gave us a lift instead. I will be recommending to everyone I know that is planning a visit Japan to stay here.

boutique hotels in Yamanashi
401-0301 Yamanashi, Fujikawaguchiko, Funatsu 1, Japan
8.9
1479 reviews
From $324

Guest Review: So spacious. Superb breakfast and dinner. Should include meals if stay in this hotel. Very near the red line bus station. Awesome view at observatory. Recommended.

boutique hotels in Yamanashi
401-0304 Yamanashi, Fujikawaguchiko, Kawaguchi 2395, Japan
9.0
1082 reviews
From $425

Guest Review: The bath and view is absolutely unbelievable. Staff truly fantastic and helpful would love to stay again!

Other great option in Yamanashi

boutique hotels in Yamanashi
船津4777-7, Fujikawaguchiko, 401-0301, JP
9.7
64 reviews
From $331

Guest Review: very good location right next to the lake and near mt. fuji. It was a great stay! would definitely recommend for groups bigger from 3 persons

boutique hotels in Yamanashi
7139-1 Kodachi Sankai, Fujikawaguchiko, JP
8.0
17 reviews
From $714
boutique hotels in Yamanashi
Kodachi 3929-1, Fujikawaguchiko, 401-0302, JP
9.5
39 reviews
From $494

Guest Review: Amazing facilities, very clean, staff were lovely. The property was very quiet and also had free ice cream. About a 30 min easy walk from the property to the main area. I would recommend staying here.

Yamanashi Boutique Hotels on the Map

Frequently Asked Questions

For an exceptional spa experience in Yamanashi, consider staying at Fuji Lake Hotel, known for its scenic views and soothing treatments. Alternatively, Hakone Retreat Före offers a tranquil environment with luxurious wellness services, perfect for relaxation after exploring the beautiful region.

Couples looking for romance will love Kinnotake Sengokuhara(Adult Only), offering a serene atmosphere and stunning views. Another great option is Mizno Hotel, where you can enjoy private onsen baths and exquisite dining, making it a perfect retreat for a romantic getaway.

Experience opulence at La Vista Fujikawaguchiko, featuring high-end amenities and a world-class spa. Additionally, Hakone Hisui provides luxurious accommodations and rejuvenating spa treatments, ensuring a lavish stay surrounded by Yamanashi's natural beauty.

Families will appreciate Beautiful Japanese Garden Kagetsu, which offers spacious rooms and a beautiful garden for children to explore. Senkyoro is another excellent choice, featuring family-oriented services and relaxing spa facilities that cater to guests of all ages.

Travelers on a budget should consider Hakone Retreat villa 1/f, which provides comfortable accommodations with access to spa services at reasonable rates. Also, Hakone Retreat Före offers great value without compromising on quality, making it a smart choice for an affordable yet relaxing stay.

Enjoy breathtaking scenery at Fuji Lake Hotel, where you can relax by the lake while enjoying spa treatments. Another option is La Vista Fujikawaguchiko, renowned for its panoramic views of Mount Fuji, providing an idyllic backdrop for your stay.