The 6 Best Boutique Hotels with Spa in Three Cities (2025)

Nestled along the glistening shores of Malta, the Three Cities—Vittoriosa, Senglea, and Cospicua—offer a captivating blend of history and vibrant Mediterranean charm. With their stunning fortifications, narrow winding streets, and rich maritime heritage, these cities exude an allure that enchants every traveler. As you explore lively piazzas dotted with traditional cafes serving delicious pastizzi and local wines, you'll discover a thriving community steeped in culture and artistry. The boutique hotel scene here beautifully mirrors this unique spirit, where personalized service and exceptional design create unforgettable stays. For instance, IBB Hotel Palazzo Bettina Malta captivates with its elegant interiors and prime location, while Cugo Gran Macina Malta showcases modern luxury set against historic architecture. Meanwhile, Iniala Harbour House offers unparalleled views and a sumptuous spa experience, making it a perfect retreat after a day of exploration. Dive into our collection of Three Cities boutique hotels with spa offerings, and begin planning your perfect Maltese getaway today!

List Of Best Boutique Hotels with Spa Three Cities

boutique hotels in Three Cities

IBB Hotel Palazzo Bettina Malta

Hotel
Wenzu Dyer 3. Birgu., BRG 1051 Birgu, Malta

Nestled in the historic heart of Birgu, IBB Hotel Palazzo Bettina Malta is a sanctuary where traditional charm meets modern luxury. With its beautifully restored stone façade and high ceilings that whisper tales of yesteryear, each moment spent here feels like stepping into a tranquil dream, perfect for couples seeking romance or travelers yearning for serenity.

Romantic Retreat - The hotel's intimate rooftop terrace invites you to unwind under a canopy of stars, offering breathtaking views of the city and harbor that breathe romance into every evening. Imagine savoring a glass of local wine as the sun dips below the horizon, casting a warm glow over the enchanting landscape.

Spa & Relaxation - Immerse yourself in the soothing ambiance of our hot tub and solarium, where each gentle breeze carries the scent of Mediterranean blooms, inviting you to bask in blissful tranquility. Local beauty treatments add an extra layer of indulgence, ensuring your stay is both rejuvenating and luxurious.

Culinary Delights - Awaken your senses each morning with a splendid array of breakfast options, from freshly baked pastries to hearty full English plates. The aroma of artisanal breads mingles with the rich scent of fresh coffee, all enjoyed either in the comfort of your room or al fresco on the sunlit terrace.

Guest Experiences - A guest recalled the warmth of the staff, particularly how they made their beloved dog feel like royalty, adorned with treats and affection. The delightfully calm atmosphere was punctuated only by the laughter of fellow travelers enjoying their moments in this charming hideaway.

boutique hotels in Three Cities

Cugo Gran Macina Malta

Hotel
Triq Marzu 31, Senglea, ISL 1040 Senglea, Malta

Nestled on the edge of Senglea, where the azure waters meet the historic charm of Malta, Cugo Gran Macina is a luxurious haven that invites couples and travelers alike to bask in its intimate splendor. With breathtaking views over the harbor and an atmosphere that whispers romance, this chic boutique hotel promises unforgettable moments, whether you're indulging in a morning coffee on your private terrace or unwinding by the shimmering outdoor pool under the Mediterranean sun.

Romantic Break - Experience an enchanting escape as you stroll hand-in-hand along the quaint waterfront, sharing whispers while the sunset paints the sky in hues of orange and pink.

Spa breaks - Indulge in holistic relaxation with tailored wellness experiences designed to rejuvenate your spirit, from soothing massages to tranquil yoga sessions overlooking the serene harbor.

Outstanding location - Situated just moments away from Valletta’s vibrant heart, savor leisurely ferry rides across the sparkling waters, feeling the gentle breeze on your skin as you approach the rich culture and history of the city.

Guest Experiences - Guests often recall the delightful surprise of a breakfast spread that tantalizes the senses, with the aroma of freshly baked pastries mingling with the salty sea air, complemented by the cheery laughter of the staff who greet you like family.

boutique hotels in Three Cities

Iniala Harbour House

Hotel
11 St. Barbara Bastion, VLT 1961 Valletta, Malta

Nestled in the heart of Valletta, Iniala Harbour House is a luxurious retreat where time seems to pause, welcoming you into its embrace of contemporary elegance and historic charm. As the sun sets over the azure waters of the harbor, the tranquil atmosphere envelops you, making it an idyllic escape for couples seeking romance or travelers yearning for refinement.

Outstanding Location - Perched amidst UNESCO World Heritage sites, the hotel offers unparalleled views of three cities that shimmer as twilight descends, inviting leisurely strolls through cobbled streets steeped in history.

Total Relaxation - Step into the wellness area, where the scent of essential oils lingers in the air and the soothing sound of water from the indoor pool harmonizes with the soft whispers of relaxation — an exquisite haven for weary souls.

Culinary Delight - Indulge your palate at ION, the rooftop restaurant where culinary artistry meets breathtaking vistas; each dish is a fragrant symphony, perfectly paired with the gentle sea breeze that dances around you as you dine under a canopy of stars.

Guest Experiences - Upon entering the sumptuous suite, the plush textures of the contemporary design were a feast for the senses; the crisp linen sheets beckoned after a day of exploration, while the staff's warm greeting felt like an embrace, ensuring every need was met with care.

boutique hotels in Three Cities

Palazzo Consiglia - IK Collection

Hotel
102, Saint Ursula Street, VLT 1234 Valletta, Malta

Nestled in the heart of Valletta, Palazzo Consiglia - IK Collection invites you to step into a realm where modern luxury meets storied history. The scent of blooming bougainvillea wafts through the air as you wander through this tranquil haven, offering an intimate escape just moments from the city's vibrant energy. With its elegant design and attentive staff, every corner whispers romance, making it perfect for couples and adventurers alike.

Romantic Retreat - Each elegantly appointed room exudes warmth, offering cozy corners for whispered conversations and quiet moments, with plush bedding that beckons you to sink in and relax after a day of exploration.

Spa Sanctuary - Bask in the tranquility of our wellness facilities, where the soothing sounds of water complement the delicate aroma of essential oils, inviting rejuvenation within the serene setting of the indoor pool and steam room.

Historical Charm - With interiors that celebrate the building's rich heritage, you'll find stunning mosaics and intricate architectural details, each telling a part of Valletta's tale, creating a beautifully layered backdrop to your stay.

Guest Experiences - Imagine waking up to the warm aroma of freshly brewed coffee drifting through the air, as Lilianna and the team insist on serving you breakfast despite your late arrival, ensuring that even the most exhausted traveler feels cherished and at home.

boutique hotels in Three Cities

66 Saint Paul's & Spa

House
Saint Paul Street, VLT 1212 Valletta, Malta

Nestled in the heart of Valletta, 66 Saint Paul's & Spa exudes an air of sophisticated elegance and intimate charm. Just a leisurely stroll from vibrant cafes and historic sites, this boutique haven invites you to unwind in its tranquil embrace, where modern comforts meet the timeless allure of Maltese culture.

Total Relaxation - Indulge in rejuvenating treatments at Myoka Sixty Six Spa, where unique therapies like cappuccino body scrubs and luxurious gold facials transform your wellness routine into a decadent ritual, all set against serene city vistas.

Historic Charm - With its prime location just moments from the breathtaking Upper Barracca Gardens and the illustrious National Museum of Archaeology, every corner beckons cultural explorers to dive deep into Valletta's rich tapestry of history.

Romantic Break - Imagine sipping a glass of bubbly on your private balcony as the sun dips below the horizon, painting the sky in hues of orange and pink—a perfect romantic setting for couples looking to create unforgettable memories together.

Guest Experiences - Upon arrival, guests are greeted by the scent of freshly brewed coffee wafting through the stylish lobby, infused with hints of Malta’s storied past shared by attentive staff. Many have marveled at the surprising touch of warmth, like discovering their room location grants them a private terrace overlooking the harbor, where they can unwind while listening to the soft murmur of Valletta coming alive around them.

boutique hotels in Three Cities

The Gomerino Hotel

Hotel
247 Saint Paul Street, VLT 1215 Valletta, Malta

Nestled in the heart of Valletta, The Gomerino Hotel invites discerning travelers to indulge in a sanctuary of elegance and relaxation. With its chic interiors and breathtaking views of the Grand Harbour, this upscale retreat offers a harmonious blend of modern luxury and historical charm, providing an intimate escape for couples or solo explorers alike.

Rooftop Oasis - Ascend to the rooftop pool where shimmering waters meet panoramic vistas. Here, guests can bask under the Maltese sun while sipping cocktails, captivated by the gentle lapping of waves and the sight of sailboats dancing across the horizon.

Culinary Delights - Start your day with a sumptuous buffet breakfast that tantalizes the senses, featuring an array of sweet pastries and savory Mediterranean delights. The aroma of freshly brewed coffee mingles with warm bread, setting the perfect tone for a day of local exploration.

Charming Location - Positioned just steps away from Valletta's historic sites, The Gomerino Hotel places you at the crossroads of culture and adventure. Stroll past vibrant markets, discover artistic gems, or simply lose yourself in the enchanting streets lined with Baroque architecture.

Guest Experiences - Guests often reminisce about their time spent in the lobby, where the soothing sounds of classical music play softly in the background, making the space feel like a serene hideaway. One visitor fondly noted how the friendly receptionist, Raiza, greeted them with a warm smile and personalized recommendations that made navigating the city so much more special.

Best Boutique Hotels with Spa that guests love in Three Cities

boutique hotels in Three Cities
247 Saint Paul Street, VLT 1215 Valletta, Malta
9.1
1447 reviews
From $1196

Guest Review: The staff was great, the rooms were clean and tidy and everything at the hotel was amazing

boutique hotels in Three Cities
102, Saint Ursula Street, VLT 1234 Valletta, Malta
9.1
384 reviews
From $1262

Guest Review: Beautiful boutique hotel, so close to everything but so quiet. Staff amazing, really enjoyed my stay.

boutique hotels in Three Cities
Wenzu Dyer 3. Birgu., BRG 1051 Birgu, Malta
9.5
291 reviews
From $238

Guest Review: Everything! Location, facilities, cleanliness & staff were all exceptional! We came from another property that was awful & were made to feel so welcome here. The staff are exceptional!

Three Cities Boutique Hotels on the Map

Frequently Asked Questions

For food lovers visiting Three Cities, Malta, consider Iniala Harbour House, known for its exquisite dining options featuring local flavors, and Palazzo Consiglia - IK Collection, which offers a delightful culinary experience within its elegant setting.

Yes! For a romantic getaway, Cugo Gran Macina Malta presents breathtaking views paired with luxurious accommodations, while 66 Saint Paul's & Spa features a tranquil spa perfect for couples seeking relaxation amidst the charming atmosphere of Three Cities.

The most luxurious options include Iniala Harbour House, boasting stunning architecture and impeccable service, and Cugo Gran Macina Malta, offering an opulent stay with panoramic views of the harbor and exceptional amenities.

Absolutely! 66 Saint Paul's & Spa is a chic boutique hotel that combines style with wellness, featuring a full-service spa. Additionally, IBB Hotel Palazzo Bettina Malta offers unique décor and spa services, making it a captivating choice for relaxation.

Families will adore 66 Saint Paul's & Spa, which provides spacious rooms and a variety of amenities for children along with a lovely spa. Also, The Gomerino Hotel features comfortable rooms and convenient access to local attractions, ensuring a great stay for families.

Certainly! Palazzo Consiglia - IK Collection offers stunning design at a reasonable price, while The Gomerino Hotel combines fashionable aesthetics with comfort, making them excellent choices for budget-conscious travelers who appreciate style.